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Part I: Multiple Alignment A. Go to the EBI multiple sequence alignment tool page: (http://www.ebi.ac.uk/Tools/msa/) B. Click the "Launch Clustal Omega" link and at step 1 paste the CLUSTAL query from the Week 4 links page into the sequences in any supported format window. C. At step 2, click on "output format" and cha
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Make a graph of column F in the isometric weights spreadsheet (50 lb column). What part of the typical processing of EMG does the signal in the F column look like?

- *S5: Discuss appropriate and informed career management choices and entrepreneurial issues* - Consider including a section on the practical applications of studying flaviviruses and pseudotyped viruses in terms of career opportunities and entrepreneurship.

1. Enzymes: Biological Engineering to Support Bioreactors and Biosensors Enzymes in Weapons Production and Weapons Defense - • Enzymes in Weapons in Bioremediation - a report of at least 2 pages in length (1.5 spacing) with citations (pictures and diagrams are welcome and accepted (and improve your grade) but do not contribute to the 2 pages of report). Please include at least three examples with your general topic description. References

2nd submission It should be exactly like this How does this relate to business and entrepreneurship plus career management? Which businesses have seen an opportunity so far? smartCells go Cord blood and adult stem cell storage company based in the UK offering package options for approximately 2000 plus c100 per year storage fee. BlueRock Therapeutics A joint venture between Bayer and Versant Ventures who have both invested a combined $225 million dollars. The company mainly focuses on technologies around cardiovascular, neurological and autoimmune applications currently. What careers and jobs are available in this sector? Bioinformatics Specialist to T Novo Foundatier for Stem and Protein Research (CP Location tom) Public Engagement Officer Location London, United Kingdom Organisation Centre for Stem Cells and Regenerative Medicine (CSCRM) Laboratory Technician Location: Copenhagen, Denmark Organisation: DanStem What is the industry worth? The global stem cell market size was estimated to be at 56.87 billion in 2016. Transparency Market Research estimate that the global market will be worth $270.5 billion by 2025 research for the job and business/nIt's a group presentation my section is employability I will talk about the jobs and business and how it's related to the job.I will be talking about how we apply this knowledge into real world ... And then I will talk about the jobs and the difference between them and I will say why would I go for this or that job... and then I will talk about the business the example of the business... Career Management Chofces b Job 2 Why لاد Job ل Why Add referebces abd if there any photo of the company logo Idea

3. Use all resources available to find and describe the biomedical engineering code of ethics, and compare it to the Hippocratic Oath. (Minimum length - approx. 1 page) References

Part I: Multiple Alignment A. Go to the EBI multiple sequence alignment tool page: (http://www.ebi.ac.uk/Tools/msa/) B. Click the "Launch Clustal Omega" link and at step 1 paste the CLUSTAL query from the Week 4 links page into the sequences in any supported format window. C. At step 2, click on "output format" and change it to Pearson/FASTA. Now click "submit" and wait for your job to finish. D. When your alignment job finishes, take a picture of your output and insert it here. E. Now click on the "Phylogenetic Tree" tab. This shows the tree used to construct the alignment. Take a picture of your tree and insert it here. F. You can create much nicer and more useful outputs using Mview. Click on the "Results Viewer" tab and then "View in MView" button. At Step 2 select input format: automatic. At step 3 on the MView submission page you can customize how your alignment is colored and formatted. Take a picture of your Mview output and insert it here. G. Return to the EBI multiple sequence alignment tool page: (http://www.ebi.ac.uk/Tools/msa) Repeat steps B-D, except click "Launch T-Coffee" for part B. H. Click on the "Phylogenetic Tree" tab. This shows the tree used to construct the T-Coffee alignment. Take a picture of your tree and insert it here. I. Now send your alignment to MView. At step 3 on the MView submission page be sure to use the same settings as for the Clustal Omega alignment. Take a picture of your Mview T- Coffee output and insert it here. J. Return to the EBI multiple sequence alignment tool page: (http://www.ebi.ac.uk/Tools/msa) Repeat steps B-D, except click "Launch MAFFT" for part B./nB. K. Click on the "Phylogenetic Tree" tab. This shows the tree used to construct the MAFFT alignment. Take a picture of your tree and insert it here. L. Now send your alignment to MView At step 3 on the MView submission page be sure to use the same settings as for the Clustal Omega alignment. Take a picture of your Mview MAFFT output and insert it here. M. Do you see any differences between the three alignments in the order in which the sequences are listed? N. Do you see any differences between the three alignments in the consensus? O. Do you see any other differences between the three alignments? P. Which alignment program would be most appropriate according to the table included in this week's lecture?/nQ. What other alignment methods might have been appropriate? R. What settings (if any) may have increased the quality of the alignment for ClustalOmega or MAFFT? Part II: Finding motifs A. Why is it useful to find motifs? B. Why might motifs be missed by global alignment programs? C. Why can motifs tell us about a group of proteins? D. Copy the "Clustal query" sequences, then go to the meme website http://meme- suite.org/tools/meme a. Select "classic mode" b. Under "Input the primary sequences" select "type in sequences" and then paste the CLUSTAL query from the Week 4 links page into the sequences under input primary sequences "10" for Maximum number of motifs to find then click the "start search" button. When your job finishes use the link at the top of the page to see your results. 1. How many motifs did it find? 2. Did each sequence have the same motifs in the same order?/nB. Now copy the sequence for gi|1084385 then analyze it with Motif Scan at prosite: http://myhits.isb-sib.ch/cgi-bin/motif scan (make sure you check all of the databases below the sequence window) 1. How many motifs did it find? 2. How many were significant (i.e. had a blue exclamation point)? 3. Were there any differences between the two sites? C. Now copy the sequence for gi|1084385 then analyze it with interproscan http://www.ebi.ac.uk/Tools/pfa/iprscan/ 1. What homologous families does this protein belong to? 2. What motifs did it identify? Were any not previously identified?

1st submission Student needs 2 Jobs and 2 Business (companies names) Based on instructions of previous work topic Poster Title New strategies to produce pseudotyped viruses to study entry of Flaviviruses Synopsis A pseudotyped virus (PV) is a viral particle harbouring the core structure of one virus and the envelope (Env), the viral protein which interacts with the cellular receptor mediating entry, of a heterologous virus: these PV have been largely employed in gene therapy, serology and virus-host interaction studies. The use of PV is particularly important to study viruses classified as hazard group 3 and 4, as they can be handled at a lower containment level (BSL1/2) and do not require enhanced security, such examples are Ebola and other filoviruses, Lassa fever, Coronaviruses. However, those viruses which assemble within the intracellular membrane systems are particularly difficult to pseudotype, as the incorporation of their Env on the surface of a PV is compromised by the endoplasmic reticulum (ER) retention signal present on their Env. These include viruses which have caused or have the potential to cause an outbreak such as flaviviruses, e.g. Zika virus, Dengue virus and Japanese Encephalitis virus (IEV). Please note: The poster title has been set and the title cannot be changed.

Fundamentals of Scientific Inquiry We have discussed science throughout history this term, paying particular attention to the paradigm shifts that occurred as scientists reorganized their data to fit with a model that had greater explanatory power. Research a paradigm shift within a particular field of science that we have not covered in class. Choose a particular scientific field (medicine, geology, biology, microbiology, genetics, physics, anatomy, ecology, astronomy, neuroscience, engineering, etc.) Choose a time in which this field was undergoing a great change in thinking or methodology. Argue for whether or not this time in history was a true paradigm shift, given what you know of Thomas Kuhn's definition. In order to do this, you should examine the differences and similarities between the previous era in this scientific field and the one that came after, with reference to the models and methods used and discoveries made.